Enzyme Catalysis: Lessons from Stereochemistry

نویسنده

  • Jeremy R. Knowles
چکیده

Stereoselectively labeled samples of E—2an Z—[9—2H,3H]— chorismate have been synthesized from Fand z-[3H, Hlphosphoen6lpyruvate by the enzymes of the shikimate pathway. The position of the tritium label at the 9—position of chorismate has been determined, from which it is evident that in the reaction catalyzed by 3-phosphoshikimate 1—carboxyvinyltransferase, the addition step has the opposite stereo— chei9l course from the elimination step. These samples of [9— H, H]chorismate have been used to determine the stereochemical course of the reaction catalyzed by chorismate mutace. It is evident that the mutase proceeds via a transition state of chair—like geometry. The stereochemical course of enzyme—catalyzed reactions has been a fruitful source of information about the mechanisms of enzymic catalysis, and has both provided important generalizations and posed challeigig questions on the nature of these1gross. For example, the use of the chiral [ H, H, Himethyl group and the chiral [ 0, 0, 0]phospho group has demonstrated that whenever methyl or phospho transfers are mediated by enzymes, the reactions proceed via in—line associative paths that invert the configuration at carbon (or phosphorus) at each transfer. Such findings allow us more tightly to define the nature of the transition state for the catalyzed process, and usefully constrain our mechanistic postulates. In other areas, stereochemical investigations have generated interesting puzzles. For instance, why should enzymic aldol condensations seemingly always proceed with retention of configuration, yet the closely related Claisen condensations apparently always go with inversion? The reasons behind such evident stereochemical imperatives will surely, when we understand them, illuminate the larger question of why enzymes are such dramatically good catalysts. In this paper, we focus on one stereochemical problem, that relates to the mechanism of chorismate mutase. This enzyme catalyzes the reaction shown in Fig. 1, which is 4___ COO chorismate mutase — OH chorismafe prepheriate 1 2 Fig. 1. The 3,3-sigmatropic rearrangement of chorismate (1) to prephenate (2), catalyzed by the enzyme chorismate mutase. — formally a Claisen rearrangement. Indeed, the mutase is the only characterized example of an enzyme that catalyzes what is —— superficially at least -— a pericyclic reaction. While there are a number of transformations in alkaloid biosynthesis that involve the Claisen—like rearrangement of dimethylallyl ethers, the enzymes that mediate these reactions have never been isolated. The stereochemical problem posed by chorismate mutase concerns the geometry of the transition state, and there are two possible formulations: 'chair—like' and 'boat—like' (Fig. 2). While unbiased non—enzymic systems generally prefer a chair geometry, this preference is rather marginal in energetic terms, and the energy difference is certainly small (2—4 kcal/mol) when compared with the large 1005 00C

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Crystal structure of cobra-venom phospholipase A2 in a complex with a transition-state analogue.

The crystal structure of a complex between a phosphonate transition-state analogue and the phospholipase A2 (PLA2) from Naja naja atra venom has been solved and refined to a resolution of 2.0 angstroms. The identical stereochemistry of the two complexes that comprise the crystal's asymmetric unit indicates both the manner in which the transition state is stabilized and how the hydrophobic fatty...

متن کامل

Enzyme-catalyzed phosphoryl transfer reactions.

PERSPECTIVES AND SUMMARY ................... ... ...................................................... 877 Classes of enzyme involving reactions at phosphorus...................................................... 878 COVALENT REACTION INTERMEDIATES, CRYPTIC AND OTHERWISE........................................................................................................ 879 Reactions of Pho...

متن کامل

The Nature of the Amino Acid Residues Involved in the Inactivation of Gluconate 6-phosphate Dehydrogenase by Iodoacetate.

has been crystallized from Can&&z utilis (1). The kinetics (2) and the stereochemistry of the reaction (3) have been studied, but very little is known of the nature of the functional groups or amino acids involved in the catalysis. This report deals with the role of one or two sulfhydryl groups in the activity of the enzyme. Rapid inactivation has been found to take place upon treatment with io...

متن کامل

Intrinsic evolutionary constraints on protease structure, enzyme acylation, and the identity of the catalytic triad.

The study of proteolysis lies at the heart of our understanding of biocatalysis, enzyme evolution, and drug development. To understand the degree of natural variation in protease active sites, we systematically evaluated simple active site features from all serine, cysteine and threonine proteases of independent lineage. This convergent evolutionary analysis revealed several interrelated and pr...

متن کامل

Structure of a Sedoheptulose 7-Phosphate Cyclase: ValA from Streptomyces hygroscopicus

Sedoheptulose 7-phosphate cyclases (SH7PCs) encompass three enzymes involved in producing the core cyclitol structures of pseudoglycosides and similar bioactive natural products. One such enzyme is ValA from Streptomyces hygroscopicus subsp. jinggangensis 5008, which makes 2-epi-5-epi-valiolone as part of the biosynthesis of the agricultural antifungal agent validamycin A. We present, as the fi...

متن کامل

Halocarbocyclization entry into the oxabicyclo[4.3.1]decyl exomethylene-δ-lactone cores of linearifolin and zaluzanin A: exploiting combinatorial catalysis.

A streamlined entry into the sesquiterpene lactone (SQL) cores of linearifolin and zaluzanin A is described. Stereochemistry is controlled through transformations uncovered by ISES (In Situ Enzymatic Screening). Absolute stereochemistry derives from kinetic resolution of 5-benzyloxypentene-1,2-oxide, utilizing a β-pinene-derived-Co(III)-salen. Relative stereochemistry (1,3-cis-fusion) is set vi...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2005